Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899198.1_cds_XP_016449167.1_43748
CDS Infomation

[gene=LOC107774205] [db_xref=GeneID:107774205] [protein=beta-adaptin-like protein A] [protein_id=XP_016449167.1] [location=join(53190..53242,53791..54307,62618..62742,64742..64940,68138..68366,71400..71566,71730..71939,72617..72727,72910..73086,73218..73661,73757..74047)] [gbkey=CDS]
Sequence

ATGGCTCCTCCAGCTCAAACTCATCGATCTCCTTCACCTTCTCAACCTTCCGGAAAAGGG
GAAGTTTCAGATTTGAAGATGCAGCTAAGGCAGCTGGCAGGTAGCCGAGCTCCCGGGACT
GATGATGCAAAGAGGGAGCTGTTCAAGAAGGTGATCTCGTGTATGACAATTGGGATAGAC
GTTTCATCAGTTTTCAGCGAAATGGTTATGTGCTCAGCTACCTCAGATATTGTTCTAAAA
AAGATGTGCTACCTTTATGTTGGGAACTATGCTAAAAACAACCCAGAACTCGCGCTTTTG
ACCATTAACTTTCTTCAGAAGGACTGCAAAGATGAGGATCCCATGATTCGCGGTTTGGCT
CTAAGGAGCTTGTGTTCTCTGCGGGTCACAAATTTGGTTGAGTATTTGGTCGGCCCCTTG
GGTTTAGGGTTGAAGGATTCAAATAGCTATGTCAGGACAGTTGCAGCCATTGGTGTTTTG
AAGTTGTACCATATCTCAGCATCAACTTGCATGGATGCGGATTTTCTTGTCACGCTTAAG
CATTTGATGCTTAATGATCGAGATGCTCAGGTTGTAGCCAACTGCTTGTGTTCCCTACAG
GAAATCTGGGGTTTGGAAGCAACAAAATCTGAGGAAGCATCAACAGAAAGAGAAACACTA
CTAAGCAAGCCACTTATTTATTACCTTTTGAATAGGTTCAAGGAGTTCAGTGAATGGGCT
CAATGTGTTGTTCTTGATCTGGTTTCAAAGTATGTGCCTGCTGACAATAATGAGATATTT
GACATGATGAATCTTCTTGAAGATAGGCTTCAACACGCTAATGGTGCTGTTGTCTTGGCA
ACAATCAAGTTATTTTTACAACTGACACTCTCTATGGCTGACATTCATCAACAGGTATAT
GAGCGTATAAAAGCACCTCTACTTACATTAGTTAGCTCAGGAGGTCCAGAGCAATCCTAT
GCCGTGTTAAGCCATTTACATTTGCTGGTGATGCGTGCACCATATATTTTTTCAGCAGAC
TACAAGCACTTCTACTGCCAGTACAATGAGCCATTTTATGTCAAAAAGCTAAAACTTGAG
ATGCTGACTGCTGTGGCAAATGAGAGCAATACATATGAAATTGTGACGGAGCTATGTGAA
TATGCTGCTAATGTTGACATTCCCATGGCGAGAGAATCGATCAGGGCTGTTGGCAAAATA
GCATTACAACAGTATGATGTTAATGCTATTGTAGATAGGCTGCTCCAGTTTTTGGAAATG
GAGAAGGACCATGTGACTGCGGAAACTCTGGTACTTGTAAAAGATCTCCTTAGGAAATAT
CCTCAATGGAGTCATGATTGTATAGCAGTAGTAGGGAATATTAGTAGCAAAACTGTCCAG
GAACCCAAAGCCAAGGCAGCTCTTATTTGGATGTTAGGGGAATACGCTCAAGACATGCAA
GATGCTCCATATATATTGGAGAGTCTTGTTGAGAATTGGGAAGAGGAGCATTCTGCAGAG
GTTCGTTTGCATCTTCTTACAGCAGTAGTGAAGTGCTTTTTCAGAAGACCACCAGAGACT
CAGAAAGCCTTGGGAGCTGTATTAGCTGCTGGTGTTAATGATTTTCATCAGGATGTCCAT
GACAGGGCATTACTATACTATAGACTTCTACAGTACAATGTCTCCGTAGCAGAGCGTGTG
GTGAATCCTCCAAAGCAAGCTGTTTCTGTCTTTGCTGATACACAAAGTAATGAAATTAAA
GATCGTATCTTTGATGAGTTTAACAGCCTCTCTGTTGTTTATCAAAAGCCTTCTTACATG
TTCACCGATAAGGAACATAGAGGGCCGTTTGCCTTCTCTGAGGAAATTGGAAATTTGTCT
ATTGGGGCAGAATCGACTGATAATGTAGTACCAGCACAGAGAATCGAGGCAAATGACAAG
GATTTACTTTTGAGTACTTCAGATAAAGAAGAAAGTAAAGGTTCGAGTCACAATGGTTCT
GCATACAGTGCTCCTGGATATGATGGTTCTTTGGCTGCACCATCTCAAACTGATCTTGTT
TCCTTGGATTACAAATCTACTCCAAGTGTGGCATCAGCTGCTTCGGCAATCGATGATTTA
CTTGGTCTTGGTTTGCCTGCTGCAGCTAGCCCTCCTCCTCCGCGTCCTGTTTTGAAGCTC
AATACTAAAGCTGTTCTAGCTCCCAACACTTTCCAGCAGAAATGGCGTCAACTGCCAATA
TCAATATCACAGGAAACCACTATTAGTCCACAAGGTGTGGCAGCAATGACAACTCCTCAA
GCGCTTATCCGTCACATGCAAGGCCATTCAATCCACTGCATAGCTTCCGGTGGTCAAGCG
CCGAACTTCAAGTTCTTCTTCTACGCACAAAAAGCAGAGGAACCATCTACCTATCTTGTA
GAATGTATAGTTAATTCATCGTCGTGTAAAGTACAGTTAAAGATCAAAGCTGATGATCAG
AGTACATCTCAGGCCTTCTCAGAATTGTTCCAGTCAGCCTTGTCCAAATTCGGTTTTTCA
TAG

Peptide Sequence

PEP ID

XP_016449167.1
PEP Infomation

PREDICTED: beta-adaptin-like protein A [Nicotiana tabacum]
Sequence

MAPPAQTHRSPSPSQPSGKGEVSDLKMQLRQLAGSRAPGTDDAKRELFKKVISCMTIGID
VSSVFSEMVMCSATSDIVLKKMCYLYVGNYAKNNPELALLTINFLQKDCKDEDPMIRGLA
LRSLCSLRVTNLVEYLVGPLGLGLKDSNSYVRTVAAIGVLKLYHISASTCMDADFLVTLK
HLMLNDRDAQVVANCLCSLQEIWGLEATKSEEASTERETLLSKPLIYYLLNRFKEFSEWA
QCVVLDLVSKYVPADNNEIFDMMNLLEDRLQHANGAVVLATIKLFLQLTLSMADIHQQVY
ERIKAPLLTLVSSGGPEQSYAVLSHLHLLVMRAPYIFSADYKHFYCQYNEPFYVKKLKLE
MLTAVANESNTYEIVTELCEYAANVDIPMARESIRAVGKIALQQYDVNAIVDRLLQFLEM
EKDHVTAETLVLVKDLLRKYPQWSHDCIAVVGNISSKTVQEPKAKAALIWMLGEYAQDMQ
DAPYILESLVENWEEEHSAEVRLHLLTAVVKCFFRRPPETQKALGAVLAAGVNDFHQDVH
DRALLYYRLLQYNVSVAERVVNPPKQAVSVFADTQSNEIKDRIFDEFNSLSVVYQKPSYM
FTDKEHRGPFAFSEEIGNLSIGAESTDNVVPAQRIEANDKDLLLSTSDKEESKGSSHNGS
AYSAPGYDGSLAAPSQTDLVSLDYKSTPSVASAASAIDDLLGLGLPAAASPPPPRPVLKL
NTKAVLAPNTFQQKWRQLPISISQETTISPQGVAAMTTPQALIRHMQGHSIHCIASGGQA
PNFKFFFYAQKAEEPSTYLVECIVNSSSCKVQLKIKADDQSTSQAFSELFQSALSKFGFS

Transcript Sequence

Gene sequence data has not been registered.